Oncology

HER2+ Breast Cancer

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Current and Future Roles of Next-Generation Sequencing in HER2+ Breast Cancer

clinical topic updates by Joseph A. Sparano, MD, FACP

Overview

Next-generation sequencing (NGS) can be a powerful tool to identify patients with actionable genomic alterations. In human epidermal growth factor receptor 2–positive (HER2+) breast cancer, applications for NGS are currently somewhat limited; however, ongoing research on HER2+ metastatic breast cancer and resistance to anti-HER2 therapies might yield additional uses for NGS in the future.

Expert Commentary

Joseph A. Sparano, MD, FACP

Ezra M. Greenspan, MD Professor in Clinical Cancer Therapeutics
Chief, Division of Hematology and Medical Oncology
Deputy Director
The Tisch Cancer Institute
Icahn School of Medicine at Mount Sinai
New York, NY

“Should more effective and less toxic agents targeting the PI3K/AKT/mTOR pathway become available that may be safely combined with HER2-directed agents, NGS will have a much greater role in HER2+ metastatic breast cancer.”

Joseph A. Sparano, MD, FACP

Somatic NGS testing of the tumor or cell-free DNA derived from the blood does not currently have a prominent role in guiding therapy for HER2+ breast cancer. If performed in this setting, it is most often in the context of patients who have metastatic disease and have exhausted standard treatment options, or those who are being screened for clinical trials testing novel targeted agents. 

Somatic NGS testing, whether of the tumor or circulating tumor DNA, generally shows a spectrum of somatic variants seen in other breast cancer subtypes, such as TP53 alterations, that are currently not actionable. Although alterations in the PI3K/AKT/mTOR pathway are common and are associated with resistance to anti-HER2 therapy, combining anti-HER2 therapy with drugs targeting this pathway has been associated with more toxicity but not greater efficacy. Should more effective and less toxic agents targeting the PI3K/AKT/mTOR pathway become available that may be safely combined with HER2-directed agents, NGS will have a much greater role in HER2+ metastatic breast cancer. Tracking circulating tumor DNA in the blood may prove to have a role in monitoring patients for disease recurrence or in replacing or complementing imaging studies on monitoring the effectiveness of therapy for metastatic disease. 

Germline testing for pathogenic germline variants associated with breast cancer is routinely recommended for younger women and for those with a strong family history of breast and/or ovarian cancer. However, HER2+ breast cancer tends to occur less often in patients who have pathogenic germline variants such as BRCA1, BRCA2, and PALB2. These germline mutations tend to be associated more with triple-negative disease. 

References

André F, O’Regan R, Ozguroglu M, et al. Everolimus for women with trastuzumab-resistant, HER2-positive, advanced breast cancer (BOLERO-3): a randomized, double-blind, placebo-controlled phase 3 trial. Lancet Oncol. 2014;15(6):580-591. doi:10.1016/S1470-2045(14)70138-X

Evans DG, Lalloo F, Howell S, Verhoef S, Woodward ER, Howell A. Low prevalence of HER2 positivity amongst BRCA1 and BRCA2 mutation carriers and in primary BRCA screens. Breast Cancer Res Treat. 2016;155(3):597-601. doi:10.1007/s10549-016-3697-z

Hurvitz SA, André F, Jiang Z, et al. Combination of everolimus with trastuzumab plus paclitaxel as first-line treatment for patients with HER2-positive advanced breast cancer (BOLERO-1): a phase 3, randomized, double-blind, multicentre trial. Lancet Oncol. 2015;16(7):816-829. doi:10.1016/S1470-2045(15)00051-0

Laderian B, Hsu R, Sandoval A, et al. Utilization of next generation sequencing (NGS)-guided therapy in breast cancer (BC): Single-institution retrospective analysis of 315 patients [abstract P4-10-19]. Abstract presented at: 2019 San Antonio Breast Cancer Symposium; December 10-14, 2019; San Antonio, TX.

Nourieh M, Vibert R, Saint-Ghislain M, et al. Next-generation sequencing in breast pathology: real impact on routine practice over a decade since its introduction. Histopathology. 2023;82(1):162-169. doi:10.1111/his.14794

Rasti AR, Guimaraes-Young A, Datko F, et al. PIK3CA mutations drive therapeutic resistance in human epidermal growth factor receptor 2-positive breast cancer. JCO Precis Oncol. 2022;6:e2100370. doi:10.1200/PO.21.00370

Sturgill EG, Misch A, Lachs R, et al. Next-generation sequencing of patients with breast cancer in community oncology clinics. JCO Precis Oncol. 2021;5:1297-1311. doi:10.1200/PO.20.00469

Swain SM, Shastry M, Hamilton E. Targeting HER2-positive breast cancer: advances and future directions. Nat Rev Drug Discov. 2023;22(2):101-126. doi:10.1038/s41573-022-00579-0

Tischler J, Crew KD, Chung WK. Cases in precision medicine: the role of tumor and germline genetic testing in breast cancer management. Ann Intern Med2019;171(12):925-930. doi:10.7326/M18-2417

Viansone A, Pellegrino B, Omarini C, et al. Prognostic significance of germline BRCA mutations in patients with HER2-POSITIVE breast cancer. Breast. 2022;65:145-150. doi:10.1016/j.breast.2022.07.012

Joseph A. Sparano, MD, FACP

Ezra M. Greenspan, MD Professor in Clinical Cancer Therapeutics
Chief, Division of Hematology and Medical Oncology
Deputy Director
The Tisch Cancer Institute
Icahn School of Medicine at Mount Sinai
New York, NY

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